seq2ngrams: Extract n-grams from sequence
In biogram: N-Gram Analysis of Biological Sequences
Description
Usage
Arguments
Details
Value
Examples
Description
Extracts vector of n-grams present in sequence(s).
Usage
1
seq2ngrams(seq, n, u, d = 0, pos = FALSE)
Arguments
seq
a vector or matrix describing sequence(s).
n
integer size of n-gram.
u
integer, numeric or character vector of all
possible unigrams.
d
integer vector of distances between elements of n-gram (0 means
consecutive elements). See Details.
pos
logical, if TRUE position-specific n_grams are counted.
Details
A format of d vector is discussed in Details of
count_ngrams.
Value
A character matrix of n-grams, where every row corresponds to a
different sequence.
Examples
1
2
3
Example output
Loading required package: slam
[,1] [,2] [,3] [,4] [,5] [,6]
[1,] "3.2.1_0.0" "2.1.1_0.0" "1.1.3_0.0" "1.3.3_0.0" "3.3.1_0.0" "3.1.4_0.0"
[2,] "2.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0" "3.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0"
[3,] "2.1.3_0.0" "1.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0"
[4,] "1.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0" "1.1.2_0.0"
[5,] "3.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0" "2.4.2_0.0" "4.2.4_0.0" "2.4.3_0.0"
[6,] "1.3.3_0.0" "3.3.3_0.0" "3.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0"
[7,] "4.3.2_0.0" "3.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0" "2.4.4_0.0" "4.4.3_0.0"
[8,] "2.1.2_0.0" "1.2.3_0.0" "2.3.4_0.0" "3.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0"
[9,] "3.2.1_0.0" "2.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.3_0.0"
[10,] "1.4.2_0.0" "4.2.4_0.0" "2.4.2_0.0" "4.2.4_0.0" "2.4.4_0.0" "4.4.3_0.0"
[11,] "2.3.1_0.0" "3.1.4_0.0" "1.4.2_0.0" "4.2.1_0.0" "2.1.2_0.0" "1.2.2_0.0"
[12,] "1.4.4_0.0" "4.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0"
[,7] [,8] [,9] [,10] [,11] [,12]
[1,] "1.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0" "1.1.3_0.0" "1.3.2_0.0"
[2,] "2.1.3_0.0" "1.3.2_0.0" "3.2.1_0.0" "2.1.4_0.0" "1.4.3_0.0" "4.3.1_0.0"
[3,] "1.1.1_0.0" "1.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0" "3.2.4_0.0" "2.4.3_0.0"
[4,] "1.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0"
[5,] "4.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0" "1.3.4_0.0"
[6,] "4.1.1_0.0" "1.1.3_0.0" "1.3.2_0.0" "3.2.3_0.0" "2.3.4_0.0" "3.4.2_0.0"
[7,] "4.3.4_0.0" "3.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0" "3.4.3_0.0" "4.3.4_0.0"
[8,] "4.2.4_0.0" "2.4.4_0.0" "4.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0" "2.3.3_0.0"
[9,] "2.3.3_0.0" "3.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0" "4.4.4_0.0" "4.4.1_0.0"
[10,] "4.3.3_0.0" "3.3.4_0.0" "3.4.3_0.0" "4.3.4_0.0" "3.4.3_0.0" "4.3.2_0.0"
[11,] "2.2.2_0.0" "2.2.3_0.0" "2.3.1_0.0" "3.1.4_0.0" "1.4.3_0.0" "4.3.1_0.0"
[12,] "2.3.3_0.0" "3.3.4_0.0" "3.4.3_0.0" "4.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0"
[,13] [,14] [,15] [,16] [,17] [,18]
[1,] "3.2.2_0.0" "2.2.4_0.0" "2.4.1_0.0" "4.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0"
[2,] "3.1.1_0.0" "1.1.4_0.0" "1.4.2_0.0" "4.2.2_0.0" "2.2.4_0.0" "2.4.4_0.0"
[3,] "4.3.1_0.0" "3.1.2_0.0" "1.2.2_0.0" "2.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0"
[4,] "3.2.3_0.0" "2.3.2_0.0" "3.2.1_0.0" "2.1.4_0.0" "1.4.3_0.0" "4.3.2_0.0"
[5,] "3.4.4_0.0" "4.4.3_0.0" "4.3.4_0.0" "3.4.4_0.0" "4.4.4_0.0" "4.4.2_0.0"
[6,] "4.2.3_0.0" "2.3.2_0.0" "3.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0" "3.3.1_0.0"
[7,] "3.4.2_0.0" "4.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0" "3.3.3_0.0" "3.3.2_0.0"
[8,] "3.3.4_0.0" "3.4.4_0.0" "4.4.2_0.0" "4.2.3_0.0" "2.3.4_0.0" "3.4.2_0.0"
[9,] "4.1.3_0.0" "1.3.3_0.0" "3.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0"
[10,] "3.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.2_0.0" "1.2.1_0.0" "2.1.2_0.0"
[11,] "3.1.2_0.0" "1.2.4_0.0" "2.4.1_0.0" "4.1.3_0.0" "1.3.2_0.0" "3.2.1_0.0"
[12,] "4.4.1_0.0" "4.1.2_0.0" "1.2.2_0.0" "2.2.3_0.0" "2.3.1_0.0" "3.1.2_0.0"
[,19] [,20] [,21] [,22] [,23] [,24]
[1,] "3.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0" "1.3.4_0.0" "3.4.4_0.0"
[2,] "4.4.4_0.0" "4.4.1_0.0" "4.1.2_0.0" "1.2.4_0.0" "2.4.3_0.0" "4.3.4_0.0"
[3,] "3.3.2_0.0" "3.2.3_0.0" "2.3.1_0.0" "3.1.3_0.0" "1.3.1_0.0" "3.1.2_0.0"
[4,] "3.2.4_0.0" "2.4.1_0.0" "4.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0"
[5,] "4.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0" "2.1.2_0.0"
[6,] "3.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0"
[7,] "3.2.1_0.0" "2.1.4_0.0" "1.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0" "1.1.2_0.0"
[8,] "4.2.2_0.0" "2.2.2_0.0" "2.2.4_0.0" "2.4.2_0.0" "4.2.3_0.0" "2.3.2_0.0"
[9,] "4.1.2_0.0" "1.2.1_0.0" "2.1.1_0.0" "1.1.1_0.0" "1.1.3_0.0" "1.3.1_0.0"
[10,] "1.2.4_0.0" "2.4.1_0.0" "4.1.1_0.0" "1.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0"
[11,] "2.1.3_0.0" "1.3.4_0.0" "3.4.1_0.0" "4.1.2_0.0" "1.2.2_0.0" "2.2.4_0.0"
[12,] "1.2.3_0.0" "2.3.3_0.0" "3.3.2_0.0" "3.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0"
[,25] [,26] [,27] [,28] [,29] [,30]
[1,] "4.4.2_0.0" "4.2.2_0.0" "2.2.1_0.0" "2.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0"
[2,] "3.4.4_0.0" "4.4.1_0.0" "4.1.4_0.0" "1.4.1_0.0" "4.1.2_0.0" "1.2.3_0.0"
[3,] "1.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0"
[4,] "3.4.4_0.0" "4.4.2_0.0" "4.2.1_0.0" "2.1.2_0.0" "1.2.2_0.0" "2.2.1_0.0"
[5,] "1.2.4_0.0" "2.4.2_0.0" "4.2.1_0.0" "2.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0"
[6,] "2.3.2_0.0" "3.2.2_0.0" "2.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0"
[7,] "1.2.2_0.0" "2.2.1_0.0" "2.1.4_0.0" "1.4.4_0.0" "4.4.3_0.0" "4.3.2_0.0"
[8,] "3.2.3_0.0" "2.3.1_0.0" "3.1.1_0.0" "1.1.1_0.0" "1.1.2_0.0" "1.2.2_0.0"
[9,] "3.1.2_0.0" "1.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0" "2.4.2_0.0" "4.2.4_0.0"
[10,] "3.3.4_0.0" "3.4.1_0.0" "4.1.1_0.0" "1.1.2_0.0" "1.2.2_0.0" "2.2.4_0.0"
[11,] "2.4.1_0.0" "4.1.1_0.0" "1.1.4_0.0" "1.4.4_0.0" "4.4.4_0.0" "4.4.1_0.0"
[12,] "2.4.3_0.0" "4.3.3_0.0" "3.3.1_0.0" "3.1.4_0.0" "1.4.3_0.0" "4.3.2_0.0"
[,31] [,32] [,33] [,34] [,35] [,36]
[1,] "1.4.2_0.0" "4.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0" "2.1.3_0.0" "1.3.1_0.0"
[2,] "2.3.3_0.0" "3.3.4_0.0" "3.4.2_0.0" "4.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0"
[3,] "1.3.4_0.0" "3.4.2_0.0" "4.2.4_0.0" "2.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0"
[4,] "2.1.2_0.0" "1.2.1_0.0" "2.1.1_0.0" "1.1.1_0.0" "1.1.3_0.0" "1.3.1_0.0"
[5,] "3.3.1_0.0" "3.1.4_0.0" "1.4.3_0.0" "4.3.4_0.0" "3.4.2_0.0" "4.2.2_0.0"
[6,] "3.2.2_0.0" "2.2.2_0.0" "2.2.3_0.0" "2.3.2_0.0" "3.2.1_0.0" "2.1.4_0.0"
[7,] "3.2.3_0.0" "2.3.4_0.0" "3.4.1_0.0" "4.1.2_0.0" "1.2.1_0.0" "2.1.2_0.0"
[8,] "2.2.4_0.0" "2.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0" "3.4.1_0.0" "4.1.1_0.0"
[9,] "2.4.2_0.0" "4.2.2_0.0" "2.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0" "2.4.1_0.0"
[10,] "2.4.2_0.0" "4.2.3_0.0" "2.3.3_0.0" "3.3.3_0.0" "3.3.3_0.0" "3.3.2_0.0"
[11,] "4.1.2_0.0" "1.2.4_0.0" "2.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0" "2.3.1_0.0"
[12,] "3.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.1_0.0" "1.1.4_0.0"
[,37] [,38] [,39] [,40] [,41] [,42]
[1,] "3.1.2_0.0" "1.2.4_0.0" "2.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0" "2.3.2_0.0"
[2,] "4.1.3_0.0" "1.3.2_0.0" "3.2.2_0.0" "2.2.2_0.0" "2.2.4_0.0" "2.4.4_0.0"
[3,] "1.1.4_0.0" "1.4.2_0.0" "4.2.3_0.0" "2.3.3_0.0" "3.3.2_0.0" "3.2.3_0.0"
[4,] "3.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0" "1.4.4_0.0" "4.4.2_0.0" "4.2.1_0.0"
[5,] "2.2.4_0.0" "2.4.3_0.0" "4.3.2_0.0" "3.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0"
[6,] "1.4.4_0.0" "4.4.4_0.0" "4.4.4_0.0" "4.4.2_0.0" "4.2.1_0.0" "2.1.4_0.0"
[7,] "1.2.1_0.0" "2.1.3_0.0" "1.3.4_0.0" "3.4.4_0.0" "4.4.2_0.0" "4.2.4_0.0"
[8,] "1.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0"
[9,] "4.1.4_0.0" "1.4.4_0.0" "4.4.2_0.0" "4.2.4_0.0" "2.4.1_0.0" "4.1.2_0.0"
[10,] "3.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.2_0.0" "1.2.2_0.0" "2.2.2_0.0"
[11,] "3.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.4_0.0"
[12,] "1.4.2_0.0" "4.2.2_0.0" "2.2.4_0.0" "2.4.3_0.0" "4.3.3_0.0" "3.3.3_0.0"
[,43] [,44] [,45] [,46] [,47] [,48]
[1,] "3.2.2_0.0" "2.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0" "1.3.2_0.0"
[2,] "4.4.4_0.0" "4.4.2_0.0" "4.2.3_0.0" "2.3.2_0.0" "3.2.3_0.0" "2.3.1_0.0"
[3,] "2.3.3_0.0" "3.3.2_0.0" "3.2.1_0.0" "2.1.2_0.0" "1.2.1_0.0" "2.1.3_0.0"
[4,] "2.1.3_0.0" "1.3.2_0.0" "3.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0"
[5,] "2.4.4_0.0" "4.4.4_0.0" "4.4.1_0.0" "4.1.2_0.0" "1.2.4_0.0" "2.4.1_0.0"
[6,] "1.4.1_0.0" "4.1.1_0.0" "1.1.3_0.0" "1.3.1_0.0" "3.1.2_0.0" "1.2.4_0.0"
[7,] "2.4.1_0.0" "4.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0"
[8,] "4.1.4_0.0" "1.4.4_0.0" "4.4.4_0.0" "4.4.2_0.0" "4.2.4_0.0" "2.4.3_0.0"
[9,] "1.2.4_0.0" "2.4.1_0.0" "4.1.4_0.0" "1.4.3_0.0" "4.3.4_0.0" "3.4.1_0.0"
[10,] "2.2.3_0.0" "2.3.3_0.0" "3.3.4_0.0" "3.4.2_0.0" "4.2.2_0.0" "2.2.2_0.0"
[11,] "2.4.3_0.0" "4.3.4_0.0" "3.4.2_0.0" "4.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0"
[12,] "3.3.4_0.0" "3.4.1_0.0" "4.1.1_0.0" "1.1.3_0.0" "1.3.4_0.0" "3.4.2_0.0"
biogram documentation built on March 31, 2020, 5:14 p.m.
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Description Usage Arguments Details Value Examples
Description
Extracts vector of n-grams present in sequence(s).
Usage
1 | seq2ngrams(seq, n, u, d = 0, pos = FALSE)
|
Arguments
seq |
a vector or matrix describing sequence(s). |
n |
|
u |
|
d |
|
pos |
|
Details
A format of d vector is discussed in Details of
count_ngrams.
Value
A character matrix of n-grams, where every row corresponds to a
different sequence.
Examples
1 2 3 |
Example output
Loading required package: slam
[,1] [,2] [,3] [,4] [,5] [,6]
[1,] "3.2.1_0.0" "2.1.1_0.0" "1.1.3_0.0" "1.3.3_0.0" "3.3.1_0.0" "3.1.4_0.0"
[2,] "2.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0" "3.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0"
[3,] "2.1.3_0.0" "1.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0"
[4,] "1.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0" "1.1.2_0.0"
[5,] "3.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0" "2.4.2_0.0" "4.2.4_0.0" "2.4.3_0.0"
[6,] "1.3.3_0.0" "3.3.3_0.0" "3.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0"
[7,] "4.3.2_0.0" "3.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0" "2.4.4_0.0" "4.4.3_0.0"
[8,] "2.1.2_0.0" "1.2.3_0.0" "2.3.4_0.0" "3.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0"
[9,] "3.2.1_0.0" "2.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.3_0.0"
[10,] "1.4.2_0.0" "4.2.4_0.0" "2.4.2_0.0" "4.2.4_0.0" "2.4.4_0.0" "4.4.3_0.0"
[11,] "2.3.1_0.0" "3.1.4_0.0" "1.4.2_0.0" "4.2.1_0.0" "2.1.2_0.0" "1.2.2_0.0"
[12,] "1.4.4_0.0" "4.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0"
[,7] [,8] [,9] [,10] [,11] [,12]
[1,] "1.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0" "1.1.3_0.0" "1.3.2_0.0"
[2,] "2.1.3_0.0" "1.3.2_0.0" "3.2.1_0.0" "2.1.4_0.0" "1.4.3_0.0" "4.3.1_0.0"
[3,] "1.1.1_0.0" "1.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0" "3.2.4_0.0" "2.4.3_0.0"
[4,] "1.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0"
[5,] "4.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0" "1.3.4_0.0"
[6,] "4.1.1_0.0" "1.1.3_0.0" "1.3.2_0.0" "3.2.3_0.0" "2.3.4_0.0" "3.4.2_0.0"
[7,] "4.3.4_0.0" "3.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0" "3.4.3_0.0" "4.3.4_0.0"
[8,] "4.2.4_0.0" "2.4.4_0.0" "4.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0" "2.3.3_0.0"
[9,] "2.3.3_0.0" "3.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0" "4.4.4_0.0" "4.4.1_0.0"
[10,] "4.3.3_0.0" "3.3.4_0.0" "3.4.3_0.0" "4.3.4_0.0" "3.4.3_0.0" "4.3.2_0.0"
[11,] "2.2.2_0.0" "2.2.3_0.0" "2.3.1_0.0" "3.1.4_0.0" "1.4.3_0.0" "4.3.1_0.0"
[12,] "2.3.3_0.0" "3.3.4_0.0" "3.4.3_0.0" "4.3.1_0.0" "3.1.4_0.0" "1.4.4_0.0"
[,13] [,14] [,15] [,16] [,17] [,18]
[1,] "3.2.2_0.0" "2.2.4_0.0" "2.4.1_0.0" "4.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0"
[2,] "3.1.1_0.0" "1.1.4_0.0" "1.4.2_0.0" "4.2.2_0.0" "2.2.4_0.0" "2.4.4_0.0"
[3,] "4.3.1_0.0" "3.1.2_0.0" "1.2.2_0.0" "2.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0"
[4,] "3.2.3_0.0" "2.3.2_0.0" "3.2.1_0.0" "2.1.4_0.0" "1.4.3_0.0" "4.3.2_0.0"
[5,] "3.4.4_0.0" "4.4.3_0.0" "4.3.4_0.0" "3.4.4_0.0" "4.4.4_0.0" "4.4.2_0.0"
[6,] "4.2.3_0.0" "2.3.2_0.0" "3.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0" "3.3.1_0.0"
[7,] "3.4.2_0.0" "4.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0" "3.3.3_0.0" "3.3.2_0.0"
[8,] "3.3.4_0.0" "3.4.4_0.0" "4.4.2_0.0" "4.2.3_0.0" "2.3.4_0.0" "3.4.2_0.0"
[9,] "4.1.3_0.0" "1.3.3_0.0" "3.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0"
[10,] "3.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.2_0.0" "1.2.1_0.0" "2.1.2_0.0"
[11,] "3.1.2_0.0" "1.2.4_0.0" "2.4.1_0.0" "4.1.3_0.0" "1.3.2_0.0" "3.2.1_0.0"
[12,] "4.4.1_0.0" "4.1.2_0.0" "1.2.2_0.0" "2.2.3_0.0" "2.3.1_0.0" "3.1.2_0.0"
[,19] [,20] [,21] [,22] [,23] [,24]
[1,] "3.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0" "1.3.4_0.0" "3.4.4_0.0"
[2,] "4.4.4_0.0" "4.4.1_0.0" "4.1.2_0.0" "1.2.4_0.0" "2.4.3_0.0" "4.3.4_0.0"
[3,] "3.3.2_0.0" "3.2.3_0.0" "2.3.1_0.0" "3.1.3_0.0" "1.3.1_0.0" "3.1.2_0.0"
[4,] "3.2.4_0.0" "2.4.1_0.0" "4.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0"
[5,] "4.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0" "2.1.2_0.0"
[6,] "3.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0"
[7,] "3.2.1_0.0" "2.1.4_0.0" "1.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0" "1.1.2_0.0"
[8,] "4.2.2_0.0" "2.2.2_0.0" "2.2.4_0.0" "2.4.2_0.0" "4.2.3_0.0" "2.3.2_0.0"
[9,] "4.1.2_0.0" "1.2.1_0.0" "2.1.1_0.0" "1.1.1_0.0" "1.1.3_0.0" "1.3.1_0.0"
[10,] "1.2.4_0.0" "2.4.1_0.0" "4.1.1_0.0" "1.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0"
[11,] "2.1.3_0.0" "1.3.4_0.0" "3.4.1_0.0" "4.1.2_0.0" "1.2.2_0.0" "2.2.4_0.0"
[12,] "1.2.3_0.0" "2.3.3_0.0" "3.3.2_0.0" "3.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0"
[,25] [,26] [,27] [,28] [,29] [,30]
[1,] "4.4.2_0.0" "4.2.2_0.0" "2.2.1_0.0" "2.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0"
[2,] "3.4.4_0.0" "4.4.1_0.0" "4.1.4_0.0" "1.4.1_0.0" "4.1.2_0.0" "1.2.3_0.0"
[3,] "1.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0"
[4,] "3.4.4_0.0" "4.4.2_0.0" "4.2.1_0.0" "2.1.2_0.0" "1.2.2_0.0" "2.2.1_0.0"
[5,] "1.2.4_0.0" "2.4.2_0.0" "4.2.1_0.0" "2.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0"
[6,] "2.3.2_0.0" "3.2.2_0.0" "2.2.1_0.0" "2.1.3_0.0" "1.3.3_0.0" "3.3.2_0.0"
[7,] "1.2.2_0.0" "2.2.1_0.0" "2.1.4_0.0" "1.4.4_0.0" "4.4.3_0.0" "4.3.2_0.0"
[8,] "3.2.3_0.0" "2.3.1_0.0" "3.1.1_0.0" "1.1.1_0.0" "1.1.2_0.0" "1.2.2_0.0"
[9,] "3.1.2_0.0" "1.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0" "2.4.2_0.0" "4.2.4_0.0"
[10,] "3.3.4_0.0" "3.4.1_0.0" "4.1.1_0.0" "1.1.2_0.0" "1.2.2_0.0" "2.2.4_0.0"
[11,] "2.4.1_0.0" "4.1.1_0.0" "1.1.4_0.0" "1.4.4_0.0" "4.4.4_0.0" "4.4.1_0.0"
[12,] "2.4.3_0.0" "4.3.3_0.0" "3.3.1_0.0" "3.1.4_0.0" "1.4.3_0.0" "4.3.2_0.0"
[,31] [,32] [,33] [,34] [,35] [,36]
[1,] "1.4.2_0.0" "4.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0" "2.1.3_0.0" "1.3.1_0.0"
[2,] "2.3.3_0.0" "3.3.4_0.0" "3.4.2_0.0" "4.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0"
[3,] "1.3.4_0.0" "3.4.2_0.0" "4.2.4_0.0" "2.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0"
[4,] "2.1.2_0.0" "1.2.1_0.0" "2.1.1_0.0" "1.1.1_0.0" "1.1.3_0.0" "1.3.1_0.0"
[5,] "3.3.1_0.0" "3.1.4_0.0" "1.4.3_0.0" "4.3.4_0.0" "3.4.2_0.0" "4.2.2_0.0"
[6,] "3.2.2_0.0" "2.2.2_0.0" "2.2.3_0.0" "2.3.2_0.0" "3.2.1_0.0" "2.1.4_0.0"
[7,] "3.2.3_0.0" "2.3.4_0.0" "3.4.1_0.0" "4.1.2_0.0" "1.2.1_0.0" "2.1.2_0.0"
[8,] "2.2.4_0.0" "2.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0" "3.4.1_0.0" "4.1.1_0.0"
[9,] "2.4.2_0.0" "4.2.2_0.0" "2.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0" "2.4.1_0.0"
[10,] "2.4.2_0.0" "4.2.3_0.0" "2.3.3_0.0" "3.3.3_0.0" "3.3.3_0.0" "3.3.2_0.0"
[11,] "4.1.2_0.0" "1.2.4_0.0" "2.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0" "2.3.1_0.0"
[12,] "3.2.2_0.0" "2.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.1_0.0" "1.1.4_0.0"
[,37] [,38] [,39] [,40] [,41] [,42]
[1,] "3.1.2_0.0" "1.2.4_0.0" "2.4.2_0.0" "4.2.2_0.0" "2.2.3_0.0" "2.3.2_0.0"
[2,] "4.1.3_0.0" "1.3.2_0.0" "3.2.2_0.0" "2.2.2_0.0" "2.2.4_0.0" "2.4.4_0.0"
[3,] "1.1.4_0.0" "1.4.2_0.0" "4.2.3_0.0" "2.3.3_0.0" "3.3.2_0.0" "3.2.3_0.0"
[4,] "3.1.4_0.0" "1.4.1_0.0" "4.1.4_0.0" "1.4.4_0.0" "4.4.2_0.0" "4.2.1_0.0"
[5,] "2.2.4_0.0" "2.4.3_0.0" "4.3.2_0.0" "3.2.1_0.0" "2.1.2_0.0" "1.2.4_0.0"
[6,] "1.4.4_0.0" "4.4.4_0.0" "4.4.4_0.0" "4.4.2_0.0" "4.2.1_0.0" "2.1.4_0.0"
[7,] "1.2.1_0.0" "2.1.3_0.0" "1.3.4_0.0" "3.4.4_0.0" "4.4.2_0.0" "4.2.4_0.0"
[8,] "1.1.4_0.0" "1.4.3_0.0" "4.3.3_0.0" "3.3.4_0.0" "3.4.4_0.0" "4.4.1_0.0"
[9,] "4.1.4_0.0" "1.4.4_0.0" "4.4.2_0.0" "4.2.4_0.0" "2.4.1_0.0" "4.1.2_0.0"
[10,] "3.2.2_0.0" "2.2.1_0.0" "2.1.1_0.0" "1.1.2_0.0" "1.2.2_0.0" "2.2.2_0.0"
[11,] "3.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.4_0.0" "1.4.2_0.0" "4.2.4_0.0"
[12,] "1.4.2_0.0" "4.2.2_0.0" "2.2.4_0.0" "2.4.3_0.0" "4.3.3_0.0" "3.3.3_0.0"
[,43] [,44] [,45] [,46] [,47] [,48]
[1,] "3.2.2_0.0" "2.2.4_0.0" "2.4.4_0.0" "4.4.1_0.0" "4.1.3_0.0" "1.3.2_0.0"
[2,] "4.4.4_0.0" "4.4.2_0.0" "4.2.3_0.0" "2.3.2_0.0" "3.2.3_0.0" "2.3.1_0.0"
[3,] "2.3.3_0.0" "3.3.2_0.0" "3.2.1_0.0" "2.1.2_0.0" "1.2.1_0.0" "2.1.3_0.0"
[4,] "2.1.3_0.0" "1.3.2_0.0" "3.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0" "2.2.2_0.0"
[5,] "2.4.4_0.0" "4.4.4_0.0" "4.4.1_0.0" "4.1.2_0.0" "1.2.4_0.0" "2.4.1_0.0"
[6,] "1.4.1_0.0" "4.1.1_0.0" "1.1.3_0.0" "1.3.1_0.0" "3.1.2_0.0" "1.2.4_0.0"
[7,] "2.4.1_0.0" "4.1.4_0.0" "1.4.4_0.0" "4.4.1_0.0" "4.1.1_0.0" "1.1.1_0.0"
[8,] "4.1.4_0.0" "1.4.4_0.0" "4.4.4_0.0" "4.4.2_0.0" "4.2.4_0.0" "2.4.3_0.0"
[9,] "1.2.4_0.0" "2.4.1_0.0" "4.1.4_0.0" "1.4.3_0.0" "4.3.4_0.0" "3.4.1_0.0"
[10,] "2.2.3_0.0" "2.3.3_0.0" "3.3.4_0.0" "3.4.2_0.0" "4.2.2_0.0" "2.2.2_0.0"
[11,] "2.4.3_0.0" "4.3.4_0.0" "3.4.2_0.0" "4.2.3_0.0" "2.3.2_0.0" "3.2.4_0.0"
[12,] "3.3.4_0.0" "3.4.1_0.0" "4.1.1_0.0" "1.1.3_0.0" "1.3.4_0.0" "3.4.2_0.0"
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