is.subst.mod.tm: Check Substitution Model Strings
In rphast: Interface to 'PHAST' Software for Comparative Genomics
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Check if a string represents a phast substitution model
Usage
1
is.subst.mod.tm(mod)
Arguments
mod
A vector of character strings representing substitution
model names to be tested
Value
A vector of logical values indicating whether each string
represents a defined substitution model
Author(s)
Melissa J. Hubisz and Adam Siepel
Examples
1
2
3
4
is.subst.mod.tm(c("JC69", "K80", "F81", "HKY85", "HKY85+Gap",
"REV", "SSREV", "REV+GC", "UNREST", "R2", "U2", "R2S",
"U2S", "R3", "R3S", "U3", "U3S", "GC", "HB",
"bad.model"))
rphast documentation built on May 1, 2019, 9:26 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Check if a string represents a phast substitution model
Usage
1 | is.subst.mod.tm(mod)
|
Arguments
mod |
A vector of character strings representing substitution model names to be tested |
Value
A vector of logical values indicating whether each string represents a defined substitution model
Author(s)
Melissa J. Hubisz and Adam Siepel
Examples
1 2 3 4 | is.subst.mod.tm(c("JC69", "K80", "F81", "HKY85", "HKY85+Gap",
"REV", "SSREV", "REV+GC", "UNREST", "R2", "U2", "R2S",
"U2S", "R3", "R3S", "U3", "U3S", "GC", "HB",
"bad.model"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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