name.ancestors: Name Ancestral Nodes
In rphast: Interface to 'PHAST' Software for Comparative Genomics
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Name ancestors of a tree
Usage
1
name.ancestors(tree)
Arguments
tree
A vector of character strings, each containing a newick tree
Value
A vector of character strings containing newick trees with all
ancestors named.
Author(s)
Melissa J. Hubisz and Adam Siepel
Examples
1
2
3
4
trees <- c("((hg18, panTro2), mm9);",
"((hg18:0.142679,(mm9:0.083220,rn4:0.090564):0.269385):
0.020666,canFam2:0.193569);")
name.ancestors(trees)
rphast documentation built on May 1, 2019, 9:26 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Name ancestors of a tree
Usage
1 | name.ancestors(tree)
|
Arguments
tree |
A vector of character strings, each containing a newick tree |
Value
A vector of character strings containing newick trees with all ancestors named.
Author(s)
Melissa J. Hubisz and Adam Siepel
Examples
1 2 3 4 | trees <- c("((hg18, panTro2), mm9);",
"((hg18:0.142679,(mm9:0.083220,rn4:0.090564):0.269385):
0.020666,canFam2:0.193569);")
name.ancestors(trees)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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