Files in strataG
Summaries and Population Structure Analyses of Genetic Data

MD5

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

src/statFst_C.cpp

src/statFis_C.cpp

src/RcppExports.cpp

src/init.c

src/Hstats_C.cpp

src/misc.funcs.cpp

src/statGst_C.cpp

src/statChi2_C.cpp

src/statJostD_C.cpp

src/statPhist_C.cpp

data/bowhead.snps.rda

data/dolph.msats.rda

data/dloop.g.rda

data/dolph.strata.rda

data/dolph.seqs.rda

data/dolph.haps.rda

data/msats.g.rda

data/bowhead.snp.position.rda

R/lowFreqSubs.R R/simGammaHaps.R R/trimNs.R R/is.gtypes.R R/mafft.R R/heterozygosity.R R/clumpp.R R/mostRepresentativeSequences.R R/neiDa.R R/numAlleles.R R/fasta.R R/structurePlot.R R/fixedSites.R

R/sysdata.rda

R/gtypes2phyDat.R R/phase.R R/write.nexus.snapp.R R/strataG-package.R R/tajimasD.R R/numGenotyped.R R/gtypes.summary.R R/labelHaplotypes.R R/as.data.frame.gtypes.R R/fixedDifferences.R R/mega.R R/RcppExports.R R/jackHWE.R R/summarizeInds.R R/summarizeSeqs.R R/numMissing.R R/as.multidna.R R/variableSites.R R/gelato.R R/hweTest.R R/dupGenotypes.R R/gtypes.initialize.R R/propUniqueAlleles.R R/maverickRun.R R/privateAlleles.R R/gtypes.show.R R/gtypes.class.R R/mostDistantSequences.R R/maf.R R/genepop.R R/alleleSplit.R R/evanno.R R/allelicRichness.R R/readGenData.R R/createConsensus.R R/LDgenepop.R R/popGenEqns.R R/summarizeAll.R R/ldNe.R R/sequence2gtypes.R R/gtypes2genind.R R/fscRead.R R/popStructTest.R R/landscape2gtypes.R R/nucleotideDiversity.R R/baseFreqs.R R/expandHaplotypes.R R/freq2GenData.R R/permuteStrata.R R/popStructStat.R R/stratify.R R/strataSplit.R R/TiTvRatio.R R/nucleotideDivergence.R R/structure.R R/sequenceLikelihoods.R R/arlequin.R R/summarizeLoci.R R/strataG-internal.R R/theta.R R/alleleFreqs.R R/sharedLoci.R R/fusFs.R R/removeSequences.R R/fscWrite.R R/gtypes.accessors.R R/mRatio.R R/writeGtypes.R R/fscRun.R R/df2gtypes.R R/iupac.R R/sfs.R R/gtypes2loci.R R/fsc.input.R vignettes/gtypes.Rmd vignettes/sequences.Rmd vignettes/population.structure.Rmd vignettes/summaries.Rmd vignettes/external.programs.Rmd

vignettes/msats.csv

inst/fastsimcoal2.html

inst/CITATION

inst/doc/gtypes.R inst/doc/gtypes.Rmd

inst/doc/population.structure.html

inst/doc/sequences.Rmd inst/doc/population.structure.Rmd inst/doc/population.structure.R

inst/doc/summaries.html

inst/doc/summaries.Rmd inst/doc/external.programs.Rmd

inst/doc/gtypes.html

inst/doc/sequences.html

inst/doc/summaries.R

inst/doc/external.programs.html

inst/doc/sequences.R

inst/extdata/dolph.seqs.fasta

strataG documentation built on Feb. 28, 2020, 9:07 a.m.

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strataG
Summaries and Population Structure Analyses of Genetic Data

Files in strataG
Summaries and Population Structure Analyses of Genetic Data

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strataG Summaries and Population Structure Analyses of Genetic Data

Files in strataG Summaries and Population Structure Analyses of Genetic Data

R Package Documentation

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We want your feedback!

strataG
Summaries and Population Structure Analyses of Genetic Data

Files in strataG
Summaries and Population Structure Analyses of Genetic Data