region_overlap: Generate a matrix detailing the percentage of overlap between...

Description Usage Arguments Value

View source: R/AnnotationHelper.R

Description

Generate a matrix detailing the percentage of overlap between query regions and a list of target regions.

Usage

1
region_overlap(query.regions, target.regions, proportion = TRUE)

Arguments

query.regions

The GRanges object detailing the regions against which the overlaps must be calculated.

target.regions

A GRangesList object detailing the regions whose overlaps against each region in query.regions must be calculated.

proportion

If TRUE, proportions are returned instead of base pair counts.

Value

A matrix detailing the overlap between teh query and the targets.


ArnaudDroitLab/ef.utils documentation built on June 19, 2018, 8:26 p.m.