region_overlap: Generate a matrix detailing the percentage of overlap between...
In ArnaudDroitLab/ef.utils: Eric Utilities
Description
Usage
Arguments
Value
View source: R/AnnotationHelper.R
Description
Generate a matrix detailing the percentage of overlap between query regions and
a list of target regions.
Usage
1
region_overlap(query.regions, target.regions, proportion = TRUE)
Arguments
query.regions
The GRanges object detailing the regions against which
the overlaps must be calculated.
target.regions
A GRangesList object detailing the regions whose overlaps
against each region in query.regions must be calculated.
proportion
If TRUE, proportions are returned instead of base pair counts.
Value
A matrix detailing the overlap between teh query and the targets.
ArnaudDroitLab/ef.utils documentation built on Aug. 13, 2019, 9:09 p.m.
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Description Usage Arguments Value
View source: R/AnnotationHelper.R
Description
Generate a matrix detailing the percentage of overlap between query regions and a list of target regions.
Usage
1 | region_overlap(query.regions, target.regions, proportion = TRUE)
|
Arguments
query.regions |
The GRanges object detailing the regions against which the overlaps must be calculated. |
target.regions |
A GRangesList object detailing the regions whose overlaps against each region in query.regions must be calculated. |
proportion |
If TRUE, proportions are returned instead of base pair counts. |
Value
A matrix detailing the overlap between teh query and the targets.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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