LTRpred.meta: Perform Meta-Analyses with LTRpred

In HajkD/LTRpred: De novo functional annotation of retrotransposons

Perform Meta-Analyses with LTRpred

Description

Run LTRpred on several genomes (sequentially) that are stored in a given folder.

Usage

LTRpred.meta(genome.folder, output.folder, cores = 1, ...)

Arguments

genome.folder	file path to folder storing genome assembly files in fasta format.
output.folder	path to the output folder storing LTRpred.meta results that will be generated.
cores	number of cores that shall be used for parallel processing.
...	arguments that shall be passed to LTRpred.

HajkD/LTRpred documentation built on April 22, 2022, 4:35 p.m.