clust2fasta: Export sequences of TEs belonging to the same cluster
In HajkD/LTRpred: De novo functional annotation of retrotransposons
clust2fasta R Documentation
Export sequences of TEs belonging to the same cluster
Description
Export sequences of TEs belonging to the same cluster to separate fasta files.
Each cluster will be stored in an individual fasta file.
Usage
clust2fasta(LTRpred.tbl, seqs)
Arguments
LTRpred.tbl
data.frame generated by LTRpred.
seqs
path to the fasta file storing the TE sequences.
Author(s)
Hajk-Georg Drost
See Also
LTRpred, cluster.members
HajkD/LTRpred documentation built on April 22, 2022, 4:35 p.m.
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| clust2fasta | R Documentation |
Export sequences of TEs belonging to the same cluster
Description
Export sequences of TEs belonging to the same cluster to separate fasta files. Each cluster will be stored in an individual fasta file.
Usage
clust2fasta(LTRpred.tbl, seqs)
Arguments
LTRpred.tbl |
|
seqs |
path to the fasta file storing the TE sequences. |
Author(s)
Hajk-Georg Drost
See Also
LTRpred, cluster.members
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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