cn2bed: Write copy number estimation results to BED file format.

In HajkD/LTRpred: De novo functional annotation of retrotransposons

Write copy number estimation results to BED file format.

Description

Format copy number estimation output to BED file format.

Usage

cn2bed(
  cn.pred,
  type = "solo",
  filename = "copy_number_est",
  sep = "\t",
  output = NULL
)

Arguments

cn.pred	data.frame object returned by ltr.cn (if type = "solo").
type	type of copy number estimation: ltr.cn (if type = "solo").
filename	name of the output file (will be extended by "*.csv").
sep	column separator.
output	path in which the output file shall be stored.

Author(s)

Hajk-Georg Drost

See Also

ltr.cn, LTRpred

HajkD/LTRpred documentation built on April 22, 2022, 4:35 p.m.