quant.repeat.space: Quantify the repeat space within a genome
In HajkD/LTRpred: De novo functional annotation of retrotransposons
View source: R/quant.repeat.space.R
quant.repeat.space R Documentation
Quantify the repeat space within a genome
Description
Quantification of the repeat space (= total length of
all Repeat Masker annotated repeats) within a given genome of interest.
Usage
quant.repeat.space(file)
Arguments
file
file path to a fasta file storing the Repeat Masker annotation file.
Author(s)
Hajk-Georg Drost
See Also
quant.protein.space, quant.cds.space
HajkD/LTRpred documentation built on April 22, 2022, 4:35 p.m.
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View source: R/quant.repeat.space.R
| quant.repeat.space | R Documentation |
Quantify the repeat space within a genome
Description
Quantification of the repeat space (= total length of all Repeat Masker annotated repeats) within a given genome of interest.
Usage
quant.repeat.space(file)
Arguments
file |
file path to a fasta file storing the Repeat Masker annotation file. |
Author(s)
Hajk-Georg Drost
See Also
quant.protein.space, quant.cds.space
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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