get.seqs: Quickly retrieve the sequences of a 'Biostrings' object
In HajkD/LTRpred: De novo functional annotation of retrotransposons
get.seqs R Documentation
Quickly retrieve the sequences of a Biostrings object
Description
Helper function to retrieve the sequences of a Biostrings object.
Usage
get.seqs(object, type = "DNA")
Arguments
object
a Biostrings object.
type
either type = "DNA" or type = "AA".
Author(s)
Hajk-Georg Drost
Examples
# read example sequences
seqs <- system.file("nt.fa",package = "LTRpred")
input.seqs <- Biostrings::readDNAStringSet(seqs)
# retrieve sequences of Biostrings object
head(get.seqs(input.seqs))
HajkD/LTRpred documentation built on April 22, 2022, 4:35 p.m.
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| get.seqs | R Documentation |
Quickly retrieve the sequences of a Biostrings object
Description
Helper function to retrieve the sequences of a Biostrings object.
Usage
get.seqs(object, type = "DNA")
Arguments
object |
a |
type |
either |
Author(s)
Hajk-Georg Drost
Examples
# read example sequences
seqs <- system.file("nt.fa",package = "LTRpred")
input.seqs <- Biostrings::readDNAStringSet(seqs)
# retrieve sequences of Biostrings object
head(get.seqs(input.seqs))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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