Description Usage Arguments Fields and Methods Author(s)
Package: aroma.seq
Class AromaSeqTransform
Object
~~|
~~+--
ParametersInterface
~~~~~~~|
~~~~~~~+--
AromaSeqTransform
Directly known subclasses:
AbstractAlignment, BamDownsampler, BamMerger, Bowtie2Alignment, BwaAlignment, FastQCReporter, FastqDownsampler, HTSeqCounting, PicardDuplicateRemoval, QDNAseqEstimation, SamTransform, TopHat2Alignment
public abstract static class AromaSeqTransform
extends ParametersInterface
...
1 2 | AromaSeqTransform(dataSet=NULL, tags="*", flavor=NULL, ...,
.className="GenericDataFileSet")
|
dataSet |
An |
tags |
Tags appended to the output data sets. |
flavor |
An optional |
... |
Additional named parameters to be recorded. |
.className |
A |
Methods:
length | - | |
process | - | |
Methods inherited from ParametersInterface:
getParameterSets, getParameters, getParametersAsString
Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, findRspReportTemplate, asThis
Henrik Bengtsson
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.