convertToBam: Converts a SAM file (set of files) set into a (sorted and...
In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
Description
Usage
Arguments
Value
Author(s)
See Also
Description
Converts a SAM file (set of files) set into a (sorted and indexed) BAM file (set of files).
Usage
1
Arguments
path
The destination path.
skip
If TRUE, already converted files are skipped, otherwise not.
overwrite
If TRUE, already converted files are ignored and overwritten.
verbose
See Verbose.
...
Not used.
Value
Returns a BamDataFile (BamDataSet).
Author(s)
Henrik Bengtsson
See Also
Internally asBam is utilized.
HenrikBengtsson/aroma.seq documentation built on Feb. 15, 2021, 2:21 a.m.
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Description Usage Arguments Value Author(s) See Also
Description
Converts a SAM file (set of files) set into a (sorted and indexed) BAM file (set of files).
Usage
1 |
Arguments
path |
The destination path. |
skip |
If |
overwrite |
If |
verbose |
See |
... |
Not used. |
Value
Returns a BamDataFile (BamDataSet).
Author(s)
Henrik Bengtsson
See Also
Internally asBam is utilized.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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