View source: R/AztekinTailData.R
AztekinTailData | R Documentation |
Obtain the Xenopus tail single-cell RNA-seq data from Aztekin et al. (2019).
AztekinTailData(legacy = FALSE)
legacy |
Logical scalar indicating whether to pull data from ExperimentHub. By default, we use data from the gypsum backend. |
Column metadata is provided in the same form as supplied in E-MTAB-7761. This contains information such as the treatment condition, batch, putative cell type, putative cell cycle phase.
The UMAP results are available as the "UMAP"
entry in the reducedDims
.
All data are downloaded from ExperimentHub and cached for local re-use.
Specific resources can be retrieved by searching for scRNAseq/aztekin-tail
.
A SingleCellExperiment object with a single matrix of UMI counts.
Aaron Lun
Aztekin C et al. (2019). Identification of a regeneration-organizing cell in the Xenopus tail. Science 364(6441), 653-658
sce <- AztekinTailData()
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.