correlate_regprobs: For a matrix of genes by motifs, calculate correlations
In MyersGroup/testisAtlas: testisAtlas: R functions and analysis scripts used in the analysis of testis single cell RNAseq
Description
Usage
Arguments
Details
Value
View source: R/functions_tss.R
Description
For a matrix of genes by motifs, calculate correlations
Usage
1
2
correlate_regprobs(regprobs = regprobs_matrix,
factorisation = SDAresults)
Arguments
regprobs
matrix; a matrix of genes by motifs
factorisation
SDA factorisation object, output of SDAtools::load_results()
Details
Calculates two-sided Pearson's product-moment correlation test. Positive and negative loadings are split and calculated seperately.
Value
Matrix of components by motifs, with entries for the test statistic t for each combination
MyersGroup/testisAtlas documentation built on Nov. 29, 2020, 9:21 p.m.
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Description Usage Arguments Details Value
View source: R/functions_tss.R
Description
For a matrix of genes by motifs, calculate correlations
Usage
1 2 | correlate_regprobs(regprobs = regprobs_matrix,
factorisation = SDAresults)
|
Arguments
regprobs |
matrix; a matrix of genes by motifs |
factorisation |
SDA factorisation object, output of SDAtools::load_results() |
Details
Calculates two-sided Pearson's product-moment correlation test. Positive and negative loadings are split and calculated seperately.
Value
Matrix of components by motifs, with entries for the test statistic t for each combination
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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