export_all_pwms: Export PWMs in MEME format
In MyersGroup/testisAtlas: testisAtlas: R functions and analysis scripts used in the analysis of testis single cell RNAseq
Description
Usage
Arguments
Details
Value
View source: R/functions_tss.R
Description
Export PWMs in MEME format
Usage
1
export_all_pwms(results_all, file, motifs_per_file = 505)
Arguments
results_all
list of outputs from MotifFinder
file
string; name of file to save PWMs to
motifs_per_file
integer; split the motifs into seperate files so you can run TOMTOM in parallel
Details
Export list of MotifFinder results to MEME format file, e.g. for input into TOMTOM
Value
nothing, results written to file
MyersGroup/testisAtlas documentation built on Nov. 29, 2020, 9:21 p.m.
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Description Usage Arguments Details Value
View source: R/functions_tss.R
Description
Export PWMs in MEME format
Usage
1 | export_all_pwms(results_all, file, motifs_per_file = 505)
|
Arguments
results_all |
list of outputs from MotifFinder |
file |
string; name of file to save PWMs to |
motifs_per_file |
integer; split the motifs into seperate files so you can run TOMTOM in parallel |
Details
Export list of MotifFinder results to MEME format file, e.g. for input into TOMTOM
Value
nothing, results written to file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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