get_top_genes: Find the top x genes for a component
In MyersGroup/testisAtlas: testisAtlas: R functions and analysis scripts used in the analysis of testis single cell RNAseq
Description
Usage
Arguments
Value
Description
Find the top x genes for a component
Usage
1
2
get_top_genes(component, factorisation = SDAresults, n = 20,
values = FALSE)
Arguments
component
integer or string; number or name of component in 'SDAresults' object
factorisation
SDA factorisation object, output of SDAtools::load_results()
n
integer; number of gene symbols to retrieve
values
logical; if TRUE (default FALSE) named gene loadings are returned
Value
charachter vector of gene symbols, or named gene loadings are returned if values=TRUE
MyersGroup/testisAtlas documentation built on Nov. 29, 2020, 9:21 p.m.
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Description Usage Arguments Value
Description
Find the top x genes for a component
Usage
1 2 | get_top_genes(component, factorisation = SDAresults, n = 20,
values = FALSE)
|
Arguments
component |
integer or string; number or name of component in 'SDAresults' object |
factorisation |
SDA factorisation object, output of SDAtools::load_results() |
n |
integer; number of gene symbols to retrieve |
values |
logical; if TRUE (default FALSE) named gene loadings are returned |
Value
charachter vector of gene symbols, or named gene loadings are returned if values=TRUE
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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