tests/testthat/test-portal_query.R
In RajLabMSSM/echodata: echoverse module: Fine-mapping data access and formatting
test_that("portal_query works", {
local_finemap <- echodata::portal_query(
dataset_types = "GWAS",
phenotypes = c("schizophrenia", "parkinson"),
file_types = "multi_finemap",
loci = c("BST1", "CHRNB1", "LRRK2"),
LD_panels = "1KGphase3"
)
testthat::expect_true(methods::is(local_finemap,"data.table"))
testthat::expect_true(nrow(local_finemap)==3)
})
RajLabMSSM/echodata documentation built on Nov. 21, 2023, 8 a.m.
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test_that("portal_query works", {
local_finemap <- echodata::portal_query(
dataset_types = "GWAS",
phenotypes = c("schizophrenia", "parkinson"),
file_types = "multi_finemap",
loci = c("BST1", "CHRNB1", "LRRK2"),
LD_panels = "1KGphase3"
)
testthat::expect_true(methods::is(local_finemap,"data.table"))
testthat::expect_true(nrow(local_finemap)==3)
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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