spladder_transform_ass: Transforms events from alternative 3' or 5' splice sites from...

In TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations

Transforms events from alternative 3' or 5' splice sites from SplAdder output format into standardized junction format

Description

Transforms events from alternative 3' or 5' splice sites from SplAdder output format into standardized junction format

Usage

spladder_transform_ass(tib, AS_class)

Arguments

tib	A tibble in SplAdder output format
AS_class	The type of alternative splice site. Can be "A3SS" or "A5SS"

Value

A tibble in standardized junction format

TRON-Bioinformatics/splice2neo documentation built on Nov. 9, 2024, 5:28 p.m.