spladder_transform_format: Transforms SplAdder output into standardized junction format
In TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations
View source: R/spladder_parsing.R
spladder_transform_format R Documentation
Transforms SplAdder output into standardized junction format
Description
Transforms SplAdder output into standardized junction format
Usage
spladder_transform_format(l)
Arguments
l
A list with tibbles that contain the SplAdder output - each for one type of alternative splicing. These types can be "A5SS",
"A3SS", "cassette_exon", "intron_retention", "mutex_exons".
Value
A tibble in standardized junction format, combining all alternative
splicing classes that are were determined with SplAdder
TRON-Bioinformatics/splice2neo documentation built on July 1, 2024, 7:57 p.m.
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View source: R/spladder_parsing.R
| spladder_transform_format | R Documentation |
Transforms SplAdder output into standardized junction format
Description
Transforms SplAdder output into standardized junction format
Usage
spladder_transform_format(l)
Arguments
l |
A list with tibbles that contain the SplAdder output - each for one type of alternative splicing. These types can be "A5SS", "A3SS", "cassette_exon", "intron_retention", "mutex_exons". |
Value
A tibble in standardized junction format, combining all alternative splicing classes that are were determined with SplAdder
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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