suppa_transform_format: Transforms SUPPA2 ioe event files file into standardized...
In TRON-Bioinformatics/splice2neo: Aberrant splice junction analysis with associated mutations
suppa_transform_format R Documentation
Transforms SUPPA2 ioe event files file into standardized junction format.
Description
Transforms SUPPA2 ioe event files file into standardized junction format.
Usage
suppa_transform_format(tib_list)
Arguments
tib_list
A list with tibbles that contain the SUPPA2 output - each for one type of alternative splicing.
These types can be "A5SS", "A3SS", "cassette_exon", "intron_retention", "mutex_exons".
Value
A tibble in standardized junction format, combining all alternative
splicing classes that are were determined with SUPPA2
TRON-Bioinformatics/splice2neo documentation built on Nov. 9, 2024, 5:28 p.m.
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| suppa_transform_format | R Documentation |
Transforms SUPPA2 ioe event files file into standardized junction format.
Description
Transforms SUPPA2 ioe event files file into standardized junction format.
Usage
suppa_transform_format(tib_list)
Arguments
tib_list |
A list with tibbles that contain the SUPPA2 output - each for one type of alternative splicing. These types can be "A5SS", "A3SS", "cassette_exon", "intron_retention", "mutex_exons". |
Value
A tibble in standardized junction format, combining all alternative splicing classes that are were determined with SUPPA2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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