toy_cds: An example CDS annotation GRangesList from a subset of human...

toy_cdsR Documentation

An example CDS annotation GRangesList from a subset of human genome

Description

This is a GRangesList object with GenomicRanges for each transcript consisting of CDS ranges. This data set is a subset of annotations of human (hg19) restricted to this regions:

Usage

toy_cds

Format

A GRangesList object with GRanges objects.

Details

  • chr2:152000000-180000000

  • chr17:41100000-41280000

Source

ftp://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_34/GRCh37_mapping/gencode.v34lift37.annotation.gtf.gz


TRON-Bioinformatics/splice2neo documentation built on Nov. 9, 2024, 5:28 p.m.