geneNodes: This function retrieves node details in an index by gene id...

In YY-SONG0718/scfindME: This is a package that adaps "scfind", a search tool for single cell RNA-seq data by gene lists, to alternative splicing analysis

This function retrieves node details in an index by gene id or gene name

Description

This function retrieves node details in an index by gene id or gene name

Usage

gene.nodes(object, gene.list, query.type)

## S4 method for signature 'SCFind,character,character'
geneNodes(object, gene.list, query.type)

Arguments

object	the SCFind object
gene.list	gene id or gene name list to find nodes
query.type	either "Gene", "external_gene_name", "Gene_node" to use in query

Value

a dataframe that contains nodes for gene.list

YY-SONG0718/scfindME documentation built on April 17, 2023, 4:27 a.m.