getRawPsi: This function gets the raw PSI of a node in a cell type

In YY-SONG0718/scfindME: This is a package that adaps "scfind", a search tool for single cell RNA-seq data by gene lists, to alternative splicing analysis

This function gets the raw PSI of a node in a cell type

Description

This function gets the raw PSI of a node in a cell type

Usage

get.raw.psi(object, node.list, cell.types)

## S4 method for signature 'SCFind,character,character'
getRawPsi(object, node.list, cell.types)

Arguments

object	the SCFind object
node.list	several nodes that we wish to get the raw PSI
cell.types	cell type tp query, can only query one cell type at once

Value

a dataframe that contains raw psi value in the queried cell type of the gene.list

YY-SONG0718/scfindME documentation built on April 17, 2023, 4:27 a.m.