plotRawPsiHeatmap: This function plots heatmap of PSI values

In YY-SONG0718/scfindME: This is a package that adaps "scfind", a search tool for single cell RNA-seq data by gene lists, to alternative splicing analysis

This function plots heatmap of PSI values

Description

This function plots heatmap of PSI values

Usage

## S3 method for class 'raw.psi.heatmap'
plot(raw_psi, node.list, cell.types)

## S4 method for signature 'data.frame,character,character'
plotRawPsiHeatmap(raw_psi, node.list, cell.types)

Arguments

raw_psi	the raw_psi matrix from getRawPsi
node.list	a list of nodes whose raw psi is to be plotted
cell.types	a list of cell types whose raw psi is to be plotted

Value

a heatmap ggplot object

YY-SONG0718/scfindME documentation built on April 17, 2023, 4:27 a.m.