fit_single_scaling_mod: Fits single model scaling total CMPs to concentrations of a...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/core_mimosa2_funcs.R
fit_single_scaling_mod R Documentation
Fits single model scaling total CMPs to concentrations of a metabolite
Description
Fits single model scaling total CMPs to concentrations of a metabolite
Usage
fit_single_scaling_mod(
met1,
cmp_rxn_dat,
mets_melt,
rank_based = F,
rank_type = "mblm"
)
Arguments
met1
metabolite ID to fit
cmp_rxn_dat
Table of species-reaction contribution abundances
mets_melt
Table of metabolite concentrations
rank_based
Whether to use rfit instead of lm
Value
lm model object
Examples
fit_single_scaling_mod(met1, species_cmps, met_data)
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/core_mimosa2_funcs.R
| fit_single_scaling_mod | R Documentation |
Fits single model scaling total CMPs to concentrations of a metabolite
Description
Fits single model scaling total CMPs to concentrations of a metabolite
Usage
fit_single_scaling_mod(
met1,
cmp_rxn_dat,
mets_melt,
rank_based = F,
rank_type = "mblm"
)
Arguments
met1 |
metabolite ID to fit |
cmp_rxn_dat |
Table of species-reaction contribution abundances |
mets_melt |
Table of metabolite concentrations |
rank_based |
Whether to use rfit instead of lm |
Value
lm model object
Examples
fit_single_scaling_mod(met1, species_cmps, met_data)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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