get_net_dist: Get network distances between 2 compounds
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/misc_helper_functions.R
get_net_dist R Documentation
Get network distances between 2 compounds
Description
Get network distances between 2 compounds
Usage
get_net_dist(c1, c2, allnet, max_dist = 20)
Arguments
c1
first compound
c2
second compound
allnet
edge list output of generate_genomic_network
max_dist
distance at which the function will stop looking and assume the two compounds are not connected
Value
integer representing the number of reaction steps between the two compounds, or max_dist if they are not connected
Examples
get_net_dist("C00001", "C00002", allnet)
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/misc_helper_functions.R
| get_net_dist | R Documentation |
Get network distances between 2 compounds
Description
Get network distances between 2 compounds
Usage
get_net_dist(c1, c2, allnet, max_dist = 20)
Arguments
c1 |
first compound |
c2 |
second compound |
allnet |
edge list output of generate_genomic_network |
max_dist |
distance at which the function will stop looking and assume the two compounds are not connected |
Value
integer representing the number of reaction steps between the two compounds, or max_dist if they are not connected
Examples
get_net_dist("C00001", "C00002", allnet)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.