get_genomic_content_from_picrust_table: Returns the column from the picrust tables that corresponds...
In borenstein-lab/mimosa2: Model-based Integration of Metabolite Observations and Species Abundances
View source: R/speciesPicrustFunctions.R
get_genomic_content_from_picrust_table R Documentation
Returns the column from the picrust tables that corresponds to the genomic content of the indicated OTU
Description
Returns the column from the picrust tables that corresponds to the genomic content of the indicated OTU
Usage
get_genomic_content_from_picrust_table(
otu,
picrust_ko_table_directory,
picrust_ko_table_suffix
)
Arguments
otu
OTU ID
picrust_ko_table_directory
Directory of PICRUSt genome OTU predictions
picrust_ko_table_suffix
File naming of PICRUSt genome OTU predictions
Value
Genomic content for a single OTU
Examples
get_genomic_content_from_picrust_table(otu, picrust_dir, picrust_suffix)
borenstein-lab/mimosa2 documentation built on Dec. 19, 2024, 12:44 a.m.
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View source: R/speciesPicrustFunctions.R
| get_genomic_content_from_picrust_table | R Documentation |
Returns the column from the picrust tables that corresponds to the genomic content of the indicated OTU
Description
Returns the column from the picrust tables that corresponds to the genomic content of the indicated OTU
Usage
get_genomic_content_from_picrust_table(
otu,
picrust_ko_table_directory,
picrust_ko_table_suffix
)
Arguments
otu |
OTU ID |
picrust_ko_table_directory |
Directory of PICRUSt genome OTU predictions |
picrust_ko_table_suffix |
File naming of PICRUSt genome OTU predictions |
Value
Genomic content for a single OTU
Examples
get_genomic_content_from_picrust_table(otu, picrust_dir, picrust_suffix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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