checkGiottoEnvironment: checkGiottoEnvironment

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

checkGiottoEnvironment

Description

checkGiottoEnvironment

Usage

checkGiottoEnvironment(mini_install_path = NULL, verbose = TRUE)

Arguments

mini_install_path	(optional) path to miniconda or conda directory within which the giotto environment lives If not provided, automatically determined by reticulate::miniconda_path() Note the required input format: Correct format –> mini_install_path = "C:/my/conda/lives/here" OR "C:\my\conda\lives\here" INCORRECT formats –> mini_install_path = "C:/my/conda/lives/here/" AND "C:\my\conda\lives\here\"
verbose	be verbose

Details

Checks if a miniconda giotto environment can be found. Can be installed with installGiottoEnvironment.

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.