combineMetadata: combineMetadata

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

combineMetadata

Description

This function combines the cell metadata with spatial locations and enrichment results from runSpatialEnrich

Usage

combineMetadata(
  gobject,
  spat_unit = NULL,
  feat_type = NULL,
  spat_loc_name = "raw",
  spat_enr_names = NULL,
  verbose = TRUE
)

Arguments

gobject	Giotto object
spat_unit	spatial unit
feat_type	feature type
spat_loc_name	name of spatial locations to include
spat_enr_names	names of spatial enrichment results to include
verbose	verbosity

Value

Extended cell metadata in data.table format.

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.