combineSpatialCellMetadataInfo: combineSpatialCellMetadataInfo
In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox
combineSpatialCellMetadataInfo R Documentation
combineSpatialCellMetadataInfo
Description
Combine cell metadata with spatial cell information (e.g. polygon)
Usage
combineSpatialCellMetadataInfo(gobject, spat_unit = NULL, feat_type = NULL)
Arguments
gobject
Giotto object
spat_unit
spatial unit
feat_type
feature type(s)
Details
The returned data.table has the following columns:
sdimx: spatial feature location on the x-axis
sdimy: spatial feature location on the y-axis
cell_ID: unique cell ID
feat: selected feature(s)
other columns that are part of the cell metadata
Value
list of data.table(s)
drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.
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| combineSpatialCellMetadataInfo | R Documentation |
combineSpatialCellMetadataInfo
Description
Combine cell metadata with spatial cell information (e.g. polygon)
Usage
combineSpatialCellMetadataInfo(gobject, spat_unit = NULL, feat_type = NULL)
Arguments
gobject |
Giotto object |
spat_unit |
spatial unit |
feat_type |
feature type(s) |
Details
The returned data.table has the following columns:
sdimx: spatial feature location on the x-axis
sdimy: spatial feature location on the y-axis
cell_ID: unique cell ID
feat: selected feature(s)
other columns that are part of the cell metadata
Value
list of data.table(s)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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