create_spat_enr_obj: Create S4 spatEnrObj
In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

create_spat_enr_obj

R Documentation

Create S4 spatEnrObj

Description

Create S4 spatEnrObj

Usage

createSpatEnrObj(
  enrichment_data,
  name = "test",
  spat_unit = "cell",
  feat_type = "rna",
  method = NULL,
  provenance = NULL,
  misc = NULL,
  verbose = TRUE
)

Arguments

`enrichment_data`	spatial enrichment results, provided a dataframe-like object
`name`	name of S4 spatEnrObj
`spat_unit`	spatial unit of aggregated expression (e.g. 'cell')
`feat_type`	feature type of aggregated expression (e.g. 'rna', 'protein')
`method`	method used to generate spatial enrichment information
`provenance`	origin data of aggregated expression information (if applicable)
`misc`	misc additional information about the spatial enrichment or how it was generated