cropGiottoLargeImage: Crop a giotto largeImage object

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

Crop a giotto largeImage object

Description

Crop a giottoLargeImage based on crop_extent argument or given values

Usage

cropGiottoLargeImage(
  gobject = NULL,
  largeImage_name = NULL,
  giottoLargeImage = NULL,
  crop_name = "image",
  crop_extent = NULL,
  xmax_crop = NULL,
  xmin_crop = NULL,
  ymax_crop = NULL,
  ymin_crop = NULL
)

Arguments

gobject	gobject holding the giottoLargeImage
largeImage_name	name of giottoLargeImage within gobject
giottoLargeImage	alternative input param using giottoLargeImage object instead of through gobject and largeImage_name params
crop_name	arbitrary name for cropped giottoLargeImage
crop_extent	terra extent object used to crop the giottoLargeImage
xmax_crop, xmin_crop, ymax_crop, ymin_crop	crop min/max x and y bounds

Value

a giottoLargeImage object

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.