View source: R/interoperability.R
gefToGiotto | R Documentation |
Converts .gef file (output stereo-seq pipeline) into giotto subcellular object
gefToGiotto(gef_file, bin_size = "bin100", verbose = FALSE)
gef_file |
path to .gef file |
bin_size |
bin size to select from .gef file |
verbose |
be verbose |
Function in beta. Converts .gef object to Giotto object.
There are six possible choices for bin_size: bin1, bin10, bin20, bin50, bin100, bin200.
See SAW pipeline for additional information about the gef file.
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