getMultiomics | R Documentation |
Get a multiomics integration result from a Giotto object
getMultiomics(
gobject = NULL,
spat_unit = NULL,
feat_type = NULL,
integration_method = "WNN",
result_name = "theta_weighted_matrix"
)
gobject |
A Giotto object |
spat_unit |
spatial unit (e.g. 'cell') |
feat_type |
integrated feature type (e.g. 'rna_protein') |
integration_method |
multiomics integration method used. Default = 'WNN' |
result_name |
Default = 'theta_weighted_matrix' |
A multiomics integration result (e.g. theta_weighted_matrix from WNN)
Other multiomics accessor functions:
get_multiomics()
,
setMultiomics()
,
set_multiomics()
Other functions to get data from giotto object:
getDimReduction()
,
getExpression()
,
getFeatureInfo()
,
getGiottoImage()
,
getNearestNetwork()
,
getPolygonInfo()
,
getSpatialEnrichment()
,
getSpatialGrid()
,
getSpatialLocations()
,
getSpatialNetwork()
,
get_NearestNetwork()
,
get_dimReduction()
,
get_feature_info()
,
get_giottoImage()
,
get_multiomics()
,
get_polygon_info()
,
get_spatialGrid()
,
get_spatialNetwork()
,
get_spatial_enrichment()
,
get_spatial_locations()
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.