giottoToSpatialExperiment: Utility function to convert a Giotto object to a...

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

Utility function to convert a Giotto object to a SpatialExperiment object.

Description

Utility function to convert a Giotto object to a SpatialExperiment object.

Usage

giottoToSpatialExperiment(giottoObj, verbose = TRUE)

Arguments

giottoObj	Input Giotto object to convert to a SpatialExperiment object.
verbose	A boolean value specifying if progress messages should be displayed or not. Default TRUE.

Value

A SpatialExperiment object that contains data from the input Giotto object.

Examples

## Not run: 
mini_gobject <- GiottoData::loadGiottoMini('vizgen')
giottoToSpatialExperiment(mini_gobject)

## End(Not run)

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.