list_dim_reductions: list_dim_reductions

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

list_dim_reductions

Description

return the available dimension reductions

Usage

list_dim_reductions(
  gobject,
  data_type = NULL,
  spat_unit = NULL,
  feat_type = NULL,
  dim_type = NULL
)

Arguments

gobject	giotto object
data_type	"cells" or "feats" data used in dim reduction
spat_unit	spatial unit (e.g. "cell")
feat_type	feature type (e.g. "rna", "dna", "protein")
dim_type	dimensional reduction method (e.g. "pca", "umap")

Value

names and locations of dimension reduction as a data.table

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.