makeSignMatrixDWLSfromMatrix: makeSignMatrixDWLSfromMatrix

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

makeSignMatrixDWLSfromMatrix

Description

Function to convert a single-cell RNAseq matrix into a format that can be used with runDWLSDeconv.

Usage

makeSignMatrixDWLSfromMatrix(matrix, sign_gene, cell_type_vector)

Arguments

matrix	scRNA-seq matrix
sign_gene	genes to use (e.g. marker genes)
cell_type_vector	vector with cell types (length = ncol(matrix))

Value

matrix

See Also

runDWLSDeconv

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.