makeSignMatrixDWLSfromMatrix: makeSignMatrixDWLSfromMatrix

View source: R/spatial_enrichment.R

makeSignMatrixDWLSfromMatrixR Documentation

makeSignMatrixDWLSfromMatrix

Description

Function to convert a single-cell RNAseq matrix into a format that can be used with runDWLSDeconv.

Usage

makeSignMatrixDWLSfromMatrix(matrix, sign_gene, cell_type_vector)

Arguments

matrix

scRNA-seq matrix

sign_gene

genes to use (e.g. marker genes)

cell_type_vector

vector with cell types (length = ncol(matrix))

Value

matrix

See Also

runDWLSDeconv


drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.