plotInteractionChangedGenes: Plot interaction changed genes

View source: R/spatial_interaction_visuals.R

plotInteractionChangedGenesR Documentation

Plot interaction changed genes

Description

Create barplot to visualize interaction changed features

Usage

plotInteractionChangedGenes(...)

Arguments

...

Arguments passed on to plotInteractionChangedFeats

gobject

giotto object

icfObject

ICF (interaction changed feature) score object

source_type

cell type of the source cell

source_markers

markers for the source cell type

ICF_feats

named character vector of ICF features

cell_color_code

cell color code for the interacting cell types

show_plot

show plots

return_plot

return plotting object

save_plot

directly save the plot [boolean]

save_param

list of saving parameters from all_plots_save_function

default_save_name

default save name for saving, don't change, change save_name in save_param

See Also

plotInteractionChangedFeats


drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.