set_feature_info: Set feature info

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

Set feature info

Description

Set giotto polygon spatVector for features

Usage

set_feature_info(
  gobject,
  gpoints,
  feat_type = NULL,
  verbose = TRUE,
  set_defaults = TRUE,
  initialize = FALSE,
  gpolygon = NULL
)

Arguments

gobject	giotto object
gpoints	giotto points object
feat_type	feature type (e.g. "rna", "dna", "protein")
verbose	be verbose
set_defaults	set default spat_unit and feat_type. Change to FALSE only when expression and spat_info are not expected to exist.
initialize	(default = FALSE) whether to initialize the gobject before returning
gpolygon	typo do not use

Value

giotto object

See Also

Other feature info data accessor functions: getFeatureInfo(), get_feature_info(), setFeatureInfo()

Other functions to set data in giotto object: get_cell_id(), get_feat_id(), setCellMetadata(), setDimReduction(), setExpression(), setFeatureInfo(), setFeatureMetadata(), setGiottoImage(), setMultiomics(), setNearestNetwork(), setPolygonInfo(), setSpatialEnrichment(), setSpatialGrid(), setSpatialLocations(), setSpatialNetwork(), set_NearestNetwork(), set_cell_id(), set_cell_metadata(), set_dimReduction(), set_expression_values(), set_feat_id(), set_giottoImage(), set_multiomics(), set_polygon_info(), set_spatialGrid(), set_spatialNetwork(), set_spatial_enrichment(), set_spatial_locations()

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.