subset_cell_metadata: Subset cell metadata

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

Subset cell metadata

Description

Subset cell metadata from giotto object

Usage

subset_cell_metadata(
  gobject,
  feat_type = NULL,
  cell_ids,
  spat_unit,
  all_feat_types = TRUE
)

Arguments

gobject	giotto object
feat_type	feature type (e.g. "rna", "dna", "protein")
cell_ids	cell ids to keep
spat_unit	spatial unit (e.g. "cell")
all_feat_types	(boolean) applies subset operation across the whole gobject (ALL feature types), ignoring the feat_type input param. Defaults to TRUE.

drieslab/Giotto_site_suite documentation built on April 26, 2023, 11:51 p.m.