Description Usage Arguments Author(s)
View source: R/plot_gsea.leadingedge.HCL.R
Take a GSEA object, do an HCL between the leading edge genes, cut the HCL, then plot 1 HCL per page of a PDF.
1 2 3 | plot_gsea.leadingedge.HCL.1clusterPerPage(x,
main = "Leading edge similarities", xlab = "",
hclust.method = "complete", h = 0.99, ...)
|
x |
a GSEA object |
main |
the plot title |
xlab |
the x label |
hclust.method |
the hierarchical clustering method. see |
h |
numeric scalar or vector with heights where the tree should be cut. (see cutree) |
... |
see |
Mark Cowley, 2009-09-01
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