dataset_racle: Example RNA-seq dataset from the EPIC publication.
In grst/immunedeconv: Methods for immune cell deconvolution
dataset_racle R Documentation
Example RNA-seq dataset from the EPIC publication.
Description
A dataset of four RNA-seq samples from patients with metastatic melanoma and associated
'gold standard' immune cell estimates profiled with fluorescence activated cell sorting (FACS)
Usage
dataset_racle
Format
an environment with two objects:
(1) expr_mat: gene expression matrix with gene_symbols as rownames and sample identifiers as colnames.
(2) ref: FACS measurements in a data.frame with three columns: sample, cell_type, true_fraction
Source
Racle et al. (2017), eLIFE, https://doi.org/10.7554/eLife.26476.029
grst/immunedeconv documentation built on Nov. 10, 2023, 1:33 a.m.
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| dataset_racle | R Documentation |
Example RNA-seq dataset from the EPIC publication.
Description
A dataset of four RNA-seq samples from patients with metastatic melanoma and associated 'gold standard' immune cell estimates profiled with fluorescence activated cell sorting (FACS)
Usage
dataset_racle
Format
an environment with two objects:
(1) expr_mat: gene expression matrix with gene_symbols as rownames and sample identifiers as colnames.
(2) ref: FACS measurements in a data.frame with three columns: sample, cell_type, true_fraction
Source
Racle et al. (2017), eLIFE, https://doi.org/10.7554/eLife.26476.029
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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