API for grst/immunedeconv
Methods for immune cell deconvolution

Global functions
ConvertRownameToLoci Source code
DClsei Source code
DCrr Source code
DrawQQPlot Source code
GetFractions.Abbas Man page Source code
GetOutlierGenes Source code
LoadImmuneGeneExpression Source code
ParseInputExpression Source code
RemoveBatchEffect Source code
TimerINFO Source code
annotate_cell_type Man page Source code
available_datasets Man page
cell_type_map Man page
cell_type_mapping Man page
cell_type_tree Man page
celldensities Source code
check_cancer_types Man page Source code
deconvolute Man page Source code
deconvolute_cibersort Source code
deconvolute_epic Source code
deconvolute_mcp_counter Source code
deconvolute_quantiseq Source code
deconvolute_quantiseq.default Man page Source code
deconvolute_timer Man page Source code
deconvolute_timer.default Source code
deconvolute_xcell Source code
deconvolution_methods Man page
eset_to_matrix Man page Source code
example_gene_expression_matrix Man page
find_children Man page Source code
fixMixture Source code
immune_deconvolution_methods Man page
immune_deconvolution_methods-package Man page
makeQN Source code
make_bulk_eset Man page Source code
make_random_bulk Man page Source code
mapGenes Source code
map_cell_types Man page Source code
map_result_to_celltypes Man page Source code
quanTIseq Source code
quantiseq_helper Man page
scale_to_million Man page Source code
set_cibersort_binary Man page Source code
set_cibersort_mat Man page Source code
single_cell_simulation Man page
summarise_children Man page Source code
timer Man page
timer_available_cancers Man page
xCell.data Man page
grst/immunedeconv documentation built on Nov. 21, 2018, 4:37 p.m.