deconvolute_abis_default: Use ABIS to deconvolute a gene expression matrix.
In grst/immunedeconv: Methods for immune cell deconvolution
deconvolute_abis_default R Documentation
Use ABIS to deconvolute a gene expression matrix.
Description
Source code adapted from https://github.com/giannimonaco/ABIS -
server.R of the Shiny application
Usage
deconvolute_abis_default(expression, array = FALSE)
Arguments
expression
numeric matrix; genes as rows and patients as columns.
Must be TP normalized
array
logical; specifies whether the expression data are from
microarrays (TRUE) or RNAseq (FALSE)
grst/immunedeconv documentation built on Nov. 10, 2023, 1:33 a.m.
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| deconvolute_abis_default | R Documentation |
Use ABIS to deconvolute a gene expression matrix.
Description
Source code adapted from https://github.com/giannimonaco/ABIS - server.R of the Shiny application
Usage
deconvolute_abis_default(expression, array = FALSE)
Arguments
expression |
numeric matrix; genes as rows and patients as columns. Must be TP normalized |
array |
logical; specifies whether the expression data are from microarrays (TRUE) or RNAseq (FALSE) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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