findAnnotation: Find annotation associated with alignment positions.

Description Usage Arguments Value See Also

Description

Find annotation associated with alignment positions.

Usage

1
findAnnotation(ranges, aln, targetGenomes = NULL)

Arguments

ranges

a GRanges or GRangesList containing alignment positions.

aln

an annotatedAlignment instance.

targetGenomes

a character vector of genome names.

Value

A list of AnnotationList objects.

See Also

alignment2Genome, genome2Alignment, genome2Genome, sliceAlignment.


gschofl/genoslideR documentation built on May 17, 2019, 8:52 a.m.