genome2Genome: Map genomic positions in one genome to genomic positions in...

Description Usage Arguments Value See Also

Description

Map genomic positions in one genome to genomic positions in other genomes.

Usage

1
genome2Genome(ranges, aln, targetGenomes = NULL)

Arguments

ranges

a GRanges or GRangesList containing genomic positions to map to the targetGenomes.

aln

an annotatedAlignment instance.

targetGenomes

a character vector of genome names.

Value

A GRangesList object.

See Also

alignment2Genome, genome2Alignment, sliceAlignment, findAnnotation.


gschofl/genoslideR documentation built on May 17, 2019, 8:52 a.m.