minimum: INTERNAL: Map a genomic range to the alignment

In gschofl/genoslideR: Create and manipulate multiple genome alignments with annotation.

Description

INTERNAL: Map a genomic range to the alignment

Usage

minimum(a, b)

Arguments

cr	cut range (the range within a genomic hit range which we want to slice from an alignment)
map_min	Minumum position in the genomic map.
map_max	Maximum position in the genomic map
ghr	genomic hit range (range of an orthologous genomic segment within a genome)
ahr	alignment hit range (degapped range of an orthologous genomic segment within a genome)
gaps	gapranges

gschofl/genoslideR documentation built on May 17, 2019, 8:52 a.m.