SysCall: Wrapper for system commands

In gschofl/genoslideR: Create and manipulate multiple genome alignments with annotation.

Description

Wrapper for system commands

Usage

SysCall(exec, ..., args = list(), stdin = NULL, stdout = NULL,
  redirection = TRUE, style = c("unix", "gnu"), sep = " ",
  show_cmd = FALSE, intern = FALSE, input = NULL)

Arguments

exec	The system command to be invoked.
...	Arguments passed on to the system command as name-value or name=TRUE pairs.
args	Named list of arguments passed on to the system command. Is merged with ....
stdin	Input.
stdout	Output.
redirection	Redirection.
style	One of ‘unix’ or ‘gnu’.
sep	Seperator of option and option argument.
show_cmd	Have a look what the final command looks like.
intern	Passed on to system's intern argument.
input	Passed on to system's input argument.

gschofl/genoslideR documentation built on May 17, 2019, 8:52 a.m.