maskSequence: Softmask repeats and low-complexity regions using RepeatScout...
In gschofl/genoslideR: Create and manipulate multiple genome alignments with annotation.
Description
Usage
Arguments
Details
Value
Description
maskSequence will create a hidden directory ‘.masked’
in the parent directory of the submitted fasta files and place all
all intermediate files as well as the final softmasked sequence file
into this directory.
Usage
1
maskSequence(fasta)
Arguments
fasta
Path to fasta file(s).
Details
If multiple fasta files share the same parent directory, the softmasked
files are placed in individual subdirectories within ‘.masked’.
Value
Character vector. Path to softmasked file(s).
gschofl/genoslideR documentation built on May 17, 2019, 8:52 a.m.
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Description Usage Arguments Details Value
Description
maskSequence will create a hidden directory ‘.masked’
in the parent directory of the submitted fasta files and place all
all intermediate files as well as the final softmasked sequence file
into this directory.
Usage
1 | maskSequence(fasta)
|
Arguments
fasta |
Path to fasta file(s). |
Details
If multiple fasta files share the same parent directory, the softmasked files are placed in individual subdirectories within ‘.masked’.
Value
Character vector. Path to softmasked file(s).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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