Files in hemberg-lab/sctransfermap
sctransfermap for predicting cell type in single-cell data (RNA-seq and ATAC-seq)
DESCRIPTION
NAMESPACE
R/CoreMethods.R
R/test_code.R
README.md
data/10x_sparse_suffix
data/atac_cell_rev_cellontology_obo
data/atac_tissue_list
data/sparse_suffix
data/sparse_suffix_rev
data/stopwords.rda
data/tm_10x_celltype_rev_cellontology_obo
data/tm_facs_celltype
data/tm_facs_celltype_cellontology_obo
data/tm_facs_celltype_collapse2_uniq_cellontology_obo
data/tm_facs_cnt
data/tm_facs_sparse_list
inst/CoreFunction.jl
man/add_attribute_set.Rd
man/add_signature_set.Rd
man/confusion_ratio.Rd
man/convert_seurat.Rd
man/create_attribute.Rd
man/create_meta_index_av.Rd
man/create_signature.Rd
man/decorate_confusion.Rd
man/estimate_celltype.Rd
man/generate_sideinformation.Rd
man/import_sparse.Rd
man/import_tm_facs.Rd
man/importdata.Rd
man/julia_environment.Rd
man/leave_one_val.Rd
man/logistic_prediction_cell.Rd
man/make_attribute_set.Rd
man/make_cellontology.Rd
man/make_input.Rd
man/make_input_tm_facs.Rd
man/make_signature_set.Rd
man/make_stopwords.Rd
man/make_tm_facs_attribute_set.Rd
man/make_tm_facs_signature_set.Rd
man/make_w2v.Rd
man/make_w2v_sideinfo.Rd
man/n_fold_logistic.Rd
man/predict_cell.Rd
man/quick_prediction.Rd
man/quick_training.Rd
man/r2julia_sort.Rd
man/save_sparse_data.Rd
man/sparse_tm_facs.Rd
man/tissue_merge.Rd
man/tm_facs_logistic.Rd
man/validation.Rd
man/validation_sample.Rd
